A biologist's guide to analysis of DNA microarray data / by Knudsen, Steen

Table of Contents: “…Example: Visualization of Gene Clusters in Bladder Cancer --…”
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Nucleic acids as molecular diagnostics /

Table of Contents: “…4.1 Introduction4.2 Chromosomal Instability; 4.3 Microsatellite Instability; 4.4 Driver Somatic Mutations in CRC; 4.4.1 APC; 4.4.2 TP53; 4.4.3 KRAS; 4.4.4 BRAF; 4.4.5 PIK3CA; 4.4.6 Other Mutations; 4.5 Epigenetic Instability in CRC; 4.6 Hypomethylation; 4.7 CpG Island Methylator Phenotype; 4.8 Concluding Remarks; References; 5 Nucleic Acid-Based Markers in Urologic Malignancies; 5.1 Introduction; 5.2 Bladder Cancer; 5.2.1 Hereditary Factors for Bladder Cancer; 5.2.2 Single Nucleotide Polymorphisms; 5.2.3 RNA Alterations in Bladder Cancer; 5.2.3.1 FGFR3 Pathway; 5.2.3.2 p53 Pathway.…”
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State of the art in neural networks and their applications.

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Preparing literature reviews : qualitative and quantitative approaches / by Pan, M. Ling

Table of Contents: “…Machine generated contents note: Introduction to qualitative and quantitative reviews -- Selecting a topic for review -- Searching for literature in professional journals -- Retrieving and evaluating information from the Web -- Evaluating and interpreting research literature -- Taking notes and avoiding unintentional plagiarism -- Preparing a topic outline for the first draft -- Writing the first draft : basic principles -- Writing the first draft : optional techniques -- Writing the first draft : statistical issues in qualitative reviews -- Building tables to summarize literature -- Revising and refining the first draft -- Writing titles and abstracts -- Preparing a reference list -- Introduction to meta-analysis -- A closer look at meta-analysis -- Qualitative literature reviews -- Risk-taking behaviors and impulsivity among veterans with and without PTSD and mild TBI -- Spirituality among African American Women living with HIV/AIDS -- Subjective evaluations of alcohol consequences and changes in drinking behavior -- Predicting marital separation from parent-child relationships -- Positive effects of the Mediterranean diet in the prevention and management of cardiovascular disease -- Quantitative literature reviews (meta-analyses) -- Dance therapy in patients with chronic heart failure -- Tetrachloroethylene exposure and bladder cancer risk -- Exercise for depressive symptoms in stroke patients -- Appendices -- Qualitative versus quantitative research -- Quality control in qualitative research.…”

Integration of omics approaches and systems biology for clinical applications /

Table of Contents: “…Kidney Function, CKD Causes, and Histological Classification / Franco Ferrario, Fabio Pagni, Maddalena Bolognesi, Elena Ajello, Vincenzo L'Imperio, Cristina Masella, Giovambattista Capasso -- CKD / Alberto Ortiz -- Molecular Model for CKD / Marco Fernandes, Katryna Cisek, Holger Husi -- Application of Omics and Systems Medicine in Bladder Cancer / Maria Frantzi, Agnieszka Latosinska, Murat Akand, Axel S Merseburger.…”
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Computational epigenetics and diseases /

Table of Contents: “…Laskar, Raima Das, Shaheen Laskar, Bishal Dhar, Manish Kumar, Sharad Ghosh, Rosy Mondal, Yashmin Choudhury, Sankar Kumar Shosh -- Epigenome-wide DNA methylation profiles in oral cancer / Raghunath Chatterjee, Shantanab Das, Aditi Chandra, Baidehi Basu -- Computational epigenetics for breast cancer / Juan Xu, Yongsheng Li, Tingting Shao, Xia Li -- Integrative epigenomics of prostate cancer / Madonna Peter, Shivani Kamdar and Bharati Bapat -- Network analysis of epigenetic data for bladder cancer / Bor-Sen Chen -- Epigenome-wide analysis of DNA methylation in colorectal cancer / Nurul-Syakima Ab Mutalib, Rashidah Baharuddin and Rahman Jamal -- Integrative omic analysis of neuroblastoma / Kamalakannan Palanichamy -- Computational analysis of epigenetic modifications in melanoma / Ming Tang and Kunal Rai -- DNA methylome of endometrial cancer / Golnaz Asaadi Tehrani -- Epigenetics and epigenomics analysis for autoimmune diseases / Bhawna Gupta, Kumar Sagar Jaiswal, Arup Shosh, Sunil Kumar Raghav -- Computational epigenetics in lung cancer / S. …”
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Neutrophils : lifespan, functions and roles in disease /

Table of Contents: “…Choli-Papadopoulou -- Chapter 6 -- The role of neutrophils and TRAIL in BCG immunotherapy for bladder cancer / Mark P. Simons, Kevin G. Leidal, Sally J. …”
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Computational epigenetics and diseases /

Table of Contents: “…Laskar, Raima Das, Shaheen Laskar, Bishal Dhar, Manish Kumar, Sharad Ghosh, Rosy Mondal, Yashmin Choudhury, Sankar Kumar Shosh -- Epigenome-wide DNA methylation profiles in oral cancer / Raghunath Chatterjee, Shantanab Das, Aditi Chandra, Baidehi Basu -- Computational epigenetics for breast cancer / Juan Xu, Yongsheng Li, Tingting Shao, Xia Li -- Integrative epigenomics of prostate cancer / Madonna Peter, Shivani Kamdar and Bharati Bapat -- Network analysis of epigenetic data for bladder cancer / Bor-Sen Chen -- Epigenome-wide analysis of DNA methylation in colorectal cancer / Nurul-Syakima Ab Mutalib, Rashidah Baharuddin and Rahman Jamal -- Integrative omic analysis of neuroblastoma / Kamalakannan Palanichamy -- Computational analysis of epigenetic modifications in melanoma / Ming Tang and Kunal Rai -- DNA methylome of endometrial cancer / Golnaz Asaadi Tehrani -- Epigenetics and epigenomics analysis for autoimmune diseases / Bhawna Gupta, Kumar Sagar Jaiswal, Arup Shosh, Sunil Kumar Raghav -- Computational epigenetics in lung cancer / S. …”
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Encyclopedia of vitamins : new research (4 volume set) /

Table of Contents: “…Nested Case-Control Studies of 25(OH)D Level and Cancer Incidence RatesBladder Cancer; Ovarian Cancer; Prostate Cancer; Cancer Survival with Respect to Serum 25(OH)D Level; Racial Disparities in Cancer Survival; Randomized Controlled Trials; Occupation in Nordic Countries; Night-Shift Work; Vitamin D Mechanisms in Cancer Biology; Proliferation and Telomerase; Cell Cycle Control Mechanisms and Apoptosis; Cellular Stress, DNA Damage and Repair; Alterations in Cellular Microenvironment (E.G., Hypoxia) Promoting Angiogenesis and Metastasis…”
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Cytogenetic abnormalities : chromosomal, FISH, and microarray-based clinical reporting / by Zneimer, Susan Mahler

Table of Contents: “…Genetic heterogeneity -- 34. Bladder cancer FISH analysis -- 34.1.Common report comments -- 34.2. …”
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Coffee : emerging health effects and disease prevention /

Table of Contents: “…9.2.2 Diterpenes: kahweol & cafestol -- 9.2.3 Polyphenols -- 9.3 Early, transient, or acute effects of coffee consumption on CVD -- 9.3.1 Tolerance or modification -- 9.4 Coffee metabolism and CVD: genetic influences -- 9.5 Long-term habitual coffee consumption and CVD -- 9.5.1 Coffee and CHD -- 9.5.1.1 Coffee consumption, blood pressure, and hypertension -- 9.5.1.2 Coffee intake and risk of type 2 diabetes -- 9.5.1.3 Coffee and atherosclerosis -- 9.5.1.4 Coffee consumption and plasma homocysteine -- 9.6 Coffee consumption and heart failure -- 9.7 Coffee consumption and stroke -- 9.8 Summary -- References -- 10 Coffee and Cancers -- 10.1 Introduction -- 10.2 Breast cancer -- 10.3 Colorectal cancer -- 10.4 Prostate cancer -- 10.5 Bladder cancer -- 10.6 Gastric cancer -- 10.7 Ovarian cancer -- 10.8 Pancreatic cancer -- 10.9 Liver cancer -- 10.10 Head and neck cancers -- 10.11 Endometrial cancer -- 10.12 Kidney cancer -- 10.13 Brain cancer -- 10.14 Cancer survival -- 10.15 Conclusions -- References -- 11 Coffee Consumption and Mortality Risk -- 11.1 Introduction -- 11.2 Coffee consumption and all-cause mortality -- 11.3 Coffee consumption and CVD mortality -- 11.4 Coffee consumption and cancer mortality -- 11.5 Possible mechanism of CVD mortality reduction by coffee -- 11.6 Conclusions -- References -- 12 Is Coffee the Next Red Wine? …”
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